Sphingomonas sp. Root720

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Root720 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This species is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptability in various environments. The accession number for this organism is LMID00000000.1, which serves as a reference for genetic and genomic studies. The flagellated nature of Sphingomonas sp. Root720 suggests adaptability in its ecological niche, potentially allowing it to navigate through diverse substrates, including soil and plant roots. This motility can be advantageous in colonizing specific environments and interacting with other microorganisms. Understanding the characteristics of Sphingomonas sp. Root720 can provide insights into its ecological roles, particularly in rhizosphere interactions. These bacteria may play a significant role in nutrient cycling and plant health, contributing to the overall dynamics of soil microbiomes. Their presence can influence plant growth and soil fertility, highlighting the importance of studying such microorganisms in agricultural and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Root720
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Root720
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Root720 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

937487 bp

Thymine Count

927969 bp

Guanine Count

1843335 bp

Cytosine Count

1878960 bp

Genome Length

5588032 bp

Protein-coding Genes

5007 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine dioxygenaseASE22_16590Not AvailableNegative3866854 - 386742921231.8
carnitine dehydrataseASE22_16595Not AvailableNegative3867426 - 386859841088.9
hypothetical proteinASE22_16600Not AvailableNegative3868619 - 386937126363.5
methionine gamma-lyaseASE22_16605Not AvailableNegative3869371 - 387057942540.4
hypothetical proteinASE22_16610Not AvailablePositive3870716 - 387188841822.9
sarcosine oxidase subunit betaASE22_16615Not AvailablePositive3871891 - 387313845015.0
sarcosine oxidase subunit deltaASE22_16620Not AvailablePositive3873196 - 387348610727.5
sarcosine oxidase subunit alphaASE22_16625Not AvailablePositive3873483 - 3876419104256.0
hypothetical proteinASE22_16630Not AvailablePositive3876412 - 387691817979.8
formyltetrahydrofolate deformylaseASE22_16635Not AvailablePositive3876915 - 387778132067.4

Displaying genes 3521 – 3530 of 5095 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.