Sphingomonas sp. Root720

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Root720 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This species is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptability in various environments. The accession number for this organism is LMID00000000.1, which serves as a reference for genetic and genomic studies. The flagellated nature of Sphingomonas sp. Root720 suggests adaptability in its ecological niche, potentially allowing it to navigate through diverse substrates, including soil and plant roots. This motility can be advantageous in colonizing specific environments and interacting with other microorganisms. Understanding the characteristics of Sphingomonas sp. Root720 can provide insights into its ecological roles, particularly in rhizosphere interactions. These bacteria may play a significant role in nutrient cycling and plant health, contributing to the overall dynamics of soil microbiomes. Their presence can influence plant growth and soil fertility, highlighting the importance of studying such microorganisms in agricultural and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Root720
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Root720
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Root720 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

937487 bp

Thymine Count

927969 bp

Guanine Count

1843335 bp

Cytosine Count

1878960 bp

Genome Length

5588032 bp

Protein-coding Genes

5007 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mate family efflux transporterASE22_06750Not AvailablePositive1720874 - 172225949191.4
porphobilinogen deaminaseASE22_06755Not AvailablePositive1722310 - 172323632057.8
uroporphyrinogen iii synthase hem4ASE22_06760Not AvailablePositive1723233 - 172392224072.9
hypothetical proteinASE22_06765Not AvailablePositive1723954 - 172480830938.2
protease htpxASE22_06770Not AvailablePositive1725114 - 172608233795.4
sam-dependent methyltransferaseASE22_06775Not AvailablePositive1726159 - 172743644718.3
ribulose phosphate epimeraseASE22_06780Not AvailablePositive1727496 - 172815823256.2
heparinaseASE22_06785Not AvailablePositive1728169 - 172989662046.1
amino acid-binding proteinASE22_06790Not AvailablePositive1729979 - 173050618309.9
hypothetical proteinASE22_06795Not AvailableNegative1730678 - 173189844535.5

Displaying genes 1581 – 1590 of 5095 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.