Nocardioides sp. Root614

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. Root614 is characterized by having a single replicon, indicating a streamlined genomic organization. Its genomic data is accessible through the accession number LMGV00000000.1, which provides a reference point for researchers interested in studying this organism further. This bacterium belongs to the genus Nocardioides, which is known for its ability to degrade various organic compounds and its potential role in bioremediation processes. The presence of a single replicon may suggest efficient replication and resource allocation, traits often advantageous for survival in diverse environments. Understanding the genomic features of Nocardioides sp. Root614 can provide insights into its ecological role, particularly in soil ecosystems where it may contribute to nutrient cycling and organic matter degradation. The study of this bacterium could also illuminate its potential applications in environmental biotechnology, especially regarding the breakdown of pollutants. Overall, Nocardioides sp. Root614 exemplifies the ecological significance of soil-dwelling actinobacteria and their contributions to ecosystem health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. Root614
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. Root614 contig_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

800483 bp

Thymine Count

797753 bp

Guanine Count

1806178 bp

Cytosine Count

1809748 bp

Genome Length

5214352 bp

Protein-coding Genes

4775 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional uroporphyrinogen-iii c-methyltransferase/uroporphyrinogen-iii synthaseASD81_20400Not AvailablePositive4358481 - 436015759069.5
delta-aminolevulinic acid dehydrataseASD81_20405Not AvailablePositive4360295 - 436123633125.4
hypothetical proteinASD81_20410Not AvailableNegative4361300 - 436252040663.1
glutamate-1-semialdehyde aminotransferaseASD81_20415Not AvailablePositive4362808 - 436414545317.5
hypothetical proteinASD81_20420Not AvailablePositive4364142 - 436483725351.2
hypothetical proteinASD81_20425Not AvailablePositive4364834 - 436540320073.7
cytochrome c biogenesis protein rescASD81_20430Not AvailablePositive4365403 - 436616726763.3
cytochrome c biogenesis proteinASD81_20435Not AvailablePositive4366164 - 436779859382.3
c-type cytochrome biogenesis protein ccsbASD81_20440Not AvailablePositive4367795 - 436886238775.1
oxidoreductaseASD81_20445Not AvailablePositive4368876 - 436960124735.5

Displaying genes 4031 – 4040 of 4838 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.