Nocardioides sp. Root614

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. Root614 is characterized by having a single replicon, indicating a streamlined genomic organization. Its genomic data is accessible through the accession number LMGV00000000.1, which provides a reference point for researchers interested in studying this organism further. This bacterium belongs to the genus Nocardioides, which is known for its ability to degrade various organic compounds and its potential role in bioremediation processes. The presence of a single replicon may suggest efficient replication and resource allocation, traits often advantageous for survival in diverse environments. Understanding the genomic features of Nocardioides sp. Root614 can provide insights into its ecological role, particularly in soil ecosystems where it may contribute to nutrient cycling and organic matter degradation. The study of this bacterium could also illuminate its potential applications in environmental biotechnology, especially regarding the breakdown of pollutants. Overall, Nocardioides sp. Root614 exemplifies the ecological significance of soil-dwelling actinobacteria and their contributions to ecosystem health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. Root614
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. Root614 contig_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

800483 bp

Thymine Count

797753 bp

Guanine Count

1806178 bp

Cytosine Count

1809748 bp

Genome Length

5214352 bp

Protein-coding Genes

4775 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laccaseASD81_01115Not AvailableNegative238754 - 23948825286.8
cell division protein ftszASD81_01120Not AvailableNegative239520 - 24068940205.8
hypothetical proteinASD81_01125Not AvailableNegative240862 - 24161727347.1
udp-n-acetylmuramate--alanine ligaseASD81_01130Not AvailableNegative241621 - 24302147994.8
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseASD81_01135Not AvailableNegative243018 - 24411237847.1
cell division protein ftswASD81_01140Not AvailableNegative244122 - 24534243672.5
udp-n-acetylmuramoylalanine--d-glutamate ligaseASD81_01145Not AvailableNegative245399 - 24688951941.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseASD81_01150Not AvailableNegative246900 - 24797038689.9
hypothetical proteinASD81_01155Not AvailableNegative247967 - 24934946806.8
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseASD81_01160Not AvailableNegative249346 - 25087252523.4

Displaying genes 231 – 240 of 4838 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.