Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | ASD05_22040 | Not Available | Negative | 984263 - 984997 | 26020.2 |
| phytanoyl-coa dioxygenase | ASD05_22045 | Not Available | Negative | 985128 - 985979 | 32134.2 |
| urocanate hydratase | ASD05_22050 | Not Available | Negative | 985979 - 987706 | 62943.1 |
| histidine ammonia-lyase | ASD05_22055 | Not Available | Negative | 987735 - 989294 | 53617.9 |
| histidine utilization repressor | ASD05_22060 | Not Available | Negative | 989354 - 990091 | 27649.1 |
| sulfonate abc transporter atp-binding protein | ASD05_22065 | Not Available | Negative | 990395 - 991174 | 28975.0 |
| abc transporter permease | ASD05_22070 | Not Available | Negative | 991174 - 992052 | 31105.9 |
| abc transporter permease | ASD05_22075 | Not Available | Negative | 992033 - 993004 | 34094.2 |
| atp-dependent dna helicase recq | ASD05_22080 | Not Available | Positive | 993317 - 995185 | 68255.5 |
| nucleoside hydrolase | ASD05_22085 | Not Available | Negative | 995189 - 996289 | 38932.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
