Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-hexose-6-phosphate mutarotase | ASD05_00315 | Not Available | Positive | 66920 - 67753 | 30244.1 |
| imidazole glycerol phosphate synthase subunit hisf | ASD05_00320 | Not Available | Positive | 67776 - 68561 | 27331.4 |
| phosphoribosyl-amp cyclohydrolase | ASD05_00325 | Not Available | Positive | 68603 - 68992 | 14736.4 |
| phosphoribosyl-atp pyrophosphatase | ASD05_00330 | Not Available | Positive | 68989 - 69381 | 14019.4 |
| hypothetical protein | ASD05_00335 | Not Available | Positive | 69395 - 69784 | 14726.2 |
| hit family hydrolase | ASD05_00340 | Not Available | Positive | 69774 - 70133 | 13190.1 |
| preprotein translocase subunit tata | ASD05_00345 | Not Available | Positive | 70199 - 70441 | 8507.26 |
| preprotein translocase | ASD05_00350 | Not Available | Positive | 70458 - 70925 | 17223.8 |
| twin-arginine protein translocation system subunit tatc | ASD05_00355 | Not Available | Positive | 70991 - 71800 | 29529.8 |
| 2-alkenal reductase | ASD05_00360 | Not Available | Negative | 71824 - 72990 | 40628.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
