Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-hepta-3-ene-1,7-dioate hydratase | ASD05_21625 | Not Available | Positive | 886349 - 887152 | 29227.0 |
| 2-dehydro-3-deoxyglucarate aldolase | ASD05_21630 | Not Available | Positive | 887288 - 888109 | 28746.5 |
| polyketide cyclase | ASD05_21635 | Not Available | Positive | 888135 - 888605 | 17023.3 |
| dihydroxy-acid dehydratase | ASD05_21640 | Not Available | Positive | 888610 - 890343 | 60348.5 |
| twin-arginine translocation pathway signal protein | ASD05_21645 | Not Available | Positive | 890378 - 891370 | 34557.7 |
| aldolase | ASD05_21650 | Not Available | Positive | 891389 - 892180 | 28788.4 |
| 2-dehydropantoate 2-reductase | ASD05_21655 | Not Available | Positive | 892194 - 893171 | 34241.8 |
| merr family transcriptional regulator | ASD05_21660 | Not Available | Positive | 893264 - 894271 | 35163.4 |
| hypothetical protein | ASD05_21665 | Not Available | Negative | 894306 - 895097 | 28590.8 |
| multidrug dmt transporter permease | ASD05_21670 | Not Available | Negative | 895156 - 896100 | 32960.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
