Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | ASD05_21375 | Not Available | Positive | 837245 - 838204 | 35194.7 |
| fad-dependent oxidoreductase | ASD05_21380 | Not Available | Positive | 838346 - 839983 | 60139.2 |
| hypothetical protein | ASD05_21385 | Not Available | Positive | 839992 - 840189 | 7069.29 |
| homogentisate 1,2-dioxygenase | ASD05_21390 | Not Available | Positive | 840237 - 841547 | 48177.0 |
| abc transporter substrate-binding protein | ASD05_21395 | Not Available | Positive | 841544 - 842518 | 33455.7 |
| fumarylacetoacetase | ASD05_21400 | Not Available | Positive | 842556 - 843821 | 45350.8 |
| penicillin-binding protein 2 | ASD05_21405 | Not Available | Negative | 843960 - 845930 | 71514.5 |
| rod shape-determining protein mred | ASD05_21410 | Not Available | Negative | 846107 - 846628 | 19037.0 |
| rod shape-determining protein mrec | ASD05_21415 | Not Available | Negative | 846625 - 847584 | 34118.2 |
| rod shape-determining protein mreb | ASD05_21420 | Not Available | Negative | 847671 - 848714 | 36863.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
