Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | ASD05_21325 | Not Available | Positive | 827464 - 827865 | 14967.8 |
| choline dehydrogenase | ASD05_21330 | Not Available | Negative | 827873 - 829504 | 59717.8 |
| methylmalonate-semialdehyde dehydrogenase | ASD05_21335 | Not Available | Negative | 829570 - 831078 | 53642.7 |
| lysr family transcriptional regulator | ASD05_21340 | Not Available | Positive | 831196 - 832143 | 34299.3 |
| abc transporter permease | ASD05_21345 | Not Available | Positive | 832313 - 833479 | 41640.2 |
| abc transporter atp-binding protein | ASD05_21350 | Not Available | Positive | 833484 - 834323 | 30025.4 |
| mammalian cell entry protein | ASD05_21355 | Not Available | Positive | 834338 - 835297 | 33550.8 |
| hypothetical protein | ASD05_21360 | Not Available | Positive | 835318 - 836001 | 23879.6 |
| hypothetical protein | ASD05_21365 | Not Available | Positive | 836029 - 836250 | 7440.43 |
| iclr family transcriptional regulator | ASD05_21370 | Not Available | Negative | 836255 - 837100 | 29632.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
