Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | ASD05_00265 | Not Available | Positive | 57884 - 58525 | 23042.2 |
| histidinol dehydrogenase | ASD05_00270 | Not Available | Positive | 58537 - 59859 | 46664.7 |
| hypothetical protein | ASD05_00275 | Not Available | Positive | 59898 - 60731 | 29792.2 |
| hypothetical protein | ASD05_00280 | Not Available | Positive | 60731 - 61084 | 12948.6 |
| histidinol-phosphate aminotransferase | ASD05_00285 | Not Available | Positive | 61081 - 62172 | 39278.0 |
| imidazoleglycerol-phosphate dehydratase | ASD05_00290 | Not Available | Positive | 62169 - 62777 | 21899.2 |
| imidazole glycerol phosphate synthase subunit hish | ASD05_00295 | Not Available | Positive | 62797 - 63456 | 23903.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | ASD05_00300 | Not Available | Positive | 63520 - 64260 | 26009.2 |
| amino acid abc transporter substrate-binding protein | ASD05_00305 | Not Available | Negative | 64518 - 65438 | 33506.4 |
| c4-dicarboxylate abc transporter | ASD05_00310 | Not Available | Negative | 65447 - 66751 | 46383.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
