Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tctc | ASD05_21070 | Not Available | Negative | 772001 - 772978 | 34695.7 |
| salicylate hydroxylase | ASD05_21075 | Not Available | Negative | 773038 - 774285 | 45050.9 |
| fumarylacetoacetate hydrolase | ASD05_21080 | Not Available | Negative | 774310 - 775014 | 25464.5 |
| gentisate 1,2-dioxygenase | ASD05_21085 | Not Available | Negative | 775081 - 776142 | 38997.3 |
| lysr family transcriptional regulator | ASD05_21090 | Not Available | Positive | 776265 - 777161 | 33182.1 |
| acyl-coa thioesterase | ASD05_21095 | Not Available | Positive | 777261 - 777710 | 15970.2 |
| poly(hydroxyalkanoate) granule-associated protein | ASD05_21100 | Not Available | Positive | 777803 - 778279 | 16716.9 |
| tetr family transcriptional regulator | ASD05_21105 | Not Available | Positive | 778422 - 779141 | 27104.3 |
| hypothetical protein | ASD05_21110 | Not Available | Positive | 779181 - 779987 | 29074.8 |
| acyl-coa-binding protein | ASD05_21115 | Not Available | Positive | 780052 - 780312 | 9416.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
