Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--cysteine ligase | ASD05_03545 | Not Available | Positive | 744731 - 746287 | 57087.1 |
| hypothetical protein | ASD05_03550 | Not Available | Positive | 746412 - 746795 | 14253.9 |
| 3-hydroxyacyl-coa dehydrogenase | ASD05_03555 | Not Available | Positive | 746892 - 747818 | 31861.2 |
| ketosteroid isomerase | ASD05_03560 | Not Available | Positive | 747920 - 748348 | 15836.7 |
| merr family transcriptional regulator | ASD05_03565 | Not Available | Positive | 748338 - 748787 | 17054.8 |
| ribosomal subunit interface protein | ASD05_03570 | Not Available | Negative | 748794 - 749153 | 13364.6 |
| histidine kinase | ASD05_03575 | Not Available | Negative | 749278 - 749706 | 16034.5 |
| cell envelope protein smpa | ASD05_03580 | Not Available | Negative | 749852 - 750466 | 22426.1 |
| ribosome biogenesis gtpase ylqf | ASD05_03585 | Not Available | Positive | 750676 - 751638 | 34849.3 |
| phenylacetic acid degradation protein | ASD05_03590 | Not Available | Positive | 751806 - 752240 | 15166.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
