Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | ASD05_03090 | Not Available | Positive | 657581 - 659422 | 64662.9 |
| keto-deoxy-phosphogluconate aldolase | ASD05_03095 | Not Available | Positive | 659577 - 660212 | 21877.7 |
| haloacid dehalogenase | ASD05_03100 | Not Available | Positive | 660215 - 660943 | 26338.6 |
| pyridoxamine 5-phosphate oxidase | ASD05_03105 | Not Available | Negative | 660944 - 661477 | 19817.9 |
| glyoxalase i | ASD05_03110 | Not Available | Negative | 661477 - 661890 | 14864.7 |
| glutathione s-transferase | ASD05_03115 | Not Available | Negative | 661954 - 662643 | 25716.9 |
| abc transporter | ASD05_03120 | Not Available | Negative | 662749 - 663432 | 24266.2 |
| iron abc transporter permease | ASD05_03125 | Not Available | Negative | 663429 - 665111 | 58650.7 |
| iron abc transporter substrate-binding protein | ASD05_03130 | Not Available | Negative | 665201 - 666256 | 37378.9 |
| sarp family transcriptional regulator | ASD05_03135 | Not Available | Negative | 666333 - 668189 | 65395.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
