Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD05_02990 | Not Available | Negative | 638454 - 639395 | 32389.5 |
| cysteine methyltransferase | ASD05_02995 | Not Available | Negative | 639425 - 639922 | 17649.1 |
| adenosine deaminase | ASD05_03000 | Not Available | Negative | 639929 - 641533 | 57070.4 |
| phosphoglucomutase | ASD05_03005 | Not Available | Positive | 641645 - 643027 | 48504.4 |
| 3-deoxy-d-manno-octulosonic acid transferase | ASD05_03010 | Not Available | Positive | 643032 - 644414 | 49585.6 |
| channel protein tolc | ASD05_03015 | Not Available | Negative | 644545 - 646083 | 53845.1 |
| sulfurtransferase | ASD05_03020 | Not Available | Negative | 646105 - 646452 | 12486.8 |
| protein-l-isoaspartate o-methyltransferase | ASD05_03025 | Not Available | Negative | 646469 - 647146 | 24865.0 |
| tetr family transcriptional regulator | ASD05_03030 | Not Available | Negative | 647168 - 647893 | 26748.5 |
| peptide methionine sulfoxide reductase | ASD05_03035 | Not Available | Positive | 647998 - 648549 | 20187.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
