Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretin | ASD05_00165 | Not Available | Positive | 35325 - 37478 | 76148.0 |
| shikimate kinase | ASD05_00170 | Not Available | Positive | 37502 - 38050 | 20198.3 |
| 3-dehydroquinate synthase | ASD05_00175 | Not Available | Positive | 38091 - 39197 | 39094.6 |
| deoxyguanosinetriphosphate triphosphohydrolase | ASD05_00180 | Not Available | Positive | 39194 - 40324 | 42547.3 |
| mfs transporter | ASD05_00185 | Not Available | Positive | 40321 - 41565 | 42246.9 |
| peptidase | ASD05_00190 | Not Available | Positive | 41562 - 42137 | 20805.4 |
| sam-dependent methyltransferase | ASD05_00195 | Not Available | Positive | 42134 - 43021 | 32794.5 |
| transposase | ASD05_00200 | Not Available | Positive | 43058 - 43753 | 26011.9 |
| glutamate synthase | ASD05_00205 | Not Available | Positive | 43939 - 48696 | 173022.0 |
| glutamate synthase | ASD05_00210 | Not Available | Positive | 48731 - 50209 | 53684.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
