Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | ASD05_02795 | Not Available | Negative | 599281 - 600405 | 40457.2 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | ASD05_02800 | Not Available | Negative | 600430 - 601560 | 40977.8 |
| hypothetical protein | ASD05_02805 | Not Available | Negative | 601568 - 602158 | 20925.4 |
| dna gyrase subunit a | ASD05_02810 | Not Available | Negative | 602155 - 604800 | 98082.2 |
| hypothetical protein | ASD05_02815 | Not Available | Positive | 605025 - 605675 | 22824.2 |
| 3-demethylubiquinone-9 3-methyltransferase | ASD05_02820 | Not Available | Positive | 605808 - 606536 | 26678.2 |
| phosphoglycolate phosphatase | ASD05_02825 | Not Available | Positive | 606536 - 607201 | 23914.7 |
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | Positive | 607214 - 607598 | Not Available |
| hypothetical protein | ASD05_02830 | Not Available | Negative | 607667 - 607870 | 7408.9 |
| hypothetical protein | ASD05_02835 | Not Available | Negative | 607880 - 608155 | 10233.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
