Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | ASD05_02550 | Not Available | Negative | 546874 - 547473 | 21301.6 |
| 3-mercaptopyruvate sulfurtransferase | ASD05_02555 | Not Available | Negative | 547470 - 548378 | 32128.9 |
| hypothetical protein | ASD05_02560 | Not Available | Negative | 548419 - 549336 | 32011.6 |
| rieske (2fe-2s) protein | ASD05_02565 | Not Available | Negative | 549359 - 550498 | 43211.9 |
| exodeoxyribonuclease vii | ASD05_02570 | Not Available | Positive | 550774 - 551040 | 9389.16 |
| polyprenyl synthetase | ASD05_02575 | Not Available | Positive | 551037 - 551957 | 31492.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ASD05_02580 | Not Available | Positive | 552138 - 553997 | 66388.9 |
| abc transporter substrate-binding protein | ASD05_02585 | Not Available | Positive | 554108 - 555190 | 39669.5 |
| c4-dicarboxylate abc transporter | ASD05_02590 | Not Available | Negative | 555307 - 557139 | 64931.4 |
| c4-dicarboxylate abc transporter substrate-binding protein | ASD05_02595 | Not Available | Negative | 557161 - 557775 | 22779.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
