Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter | ASD05_02500 | Not Available | Negative | 534331 - 535266 | 33732.4 |
| peptide abc transporter permease | ASD05_02505 | Not Available | Negative | 535285 - 536877 | 57303.7 |
| microcystin lr degradation protein mlrc-like protein | ASD05_02510 | Not Available | Negative | 536926 - 538377 | 51363.1 |
| fad-dependent oxidoreductase | ASD05_02515 | Not Available | Negative | 538426 - 539583 | 40903.9 |
| xre family transcriptional regulator | ASD05_02520 | Not Available | Positive | 539786 - 540499 | 25565.7 |
| peptidase m20 | ASD05_02525 | Not Available | Positive | 540600 - 541859 | 44023.2 |
| small-conductance mechanosensitive channel | ASD05_02530 | Not Available | Negative | 541902 - 543995 | 77541.2 |
| hypothetical protein | ASD05_02535 | Not Available | Negative | 544163 - 544798 | 22463.1 |
| peptide abc transporter permease | ASD05_02540 | Not Available | Negative | 544805 - 546067 | 45001.3 |
| methionine abc transporter atp-binding protein | ASD05_02545 | Not Available | Negative | 546123 - 546869 | 27097.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
