Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoxide reductase catalytic subunit yedy | ASD05_00115 | Not Available | Positive | 26128 - 27147 | 37843.3 |
| sulfite oxidase | ASD05_00120 | Not Available | Positive | 27176 - 27835 | 24773.1 |
| diaminopimelate decarboxylase | ASD05_00125 | Not Available | Negative | 27846 - 29132 | 45673.9 |
| hypothetical protein | ASD05_00130 | Not Available | Negative | 29129 - 29401 | 9023.84 |
| iron donor protein cyay | ASD05_00135 | Not Available | Positive | 29414 - 29746 | 12138.1 |
| penicillin-binding protein | ASD05_00140 | Not Available | Negative | 29757 - 32171 | 87765.9 |
| pilus assembly protein pilm | ASD05_00145 | Not Available | Positive | 32412 - 33491 | 39004.7 |
| fimbrial protein | ASD05_00150 | Not Available | Positive | 33488 - 34108 | 22792.6 |
| pilus assembly protein pilo | ASD05_00155 | Not Available | Positive | 34115 - 34792 | 25037.1 |
| pilus assembly protein pilp | ASD05_00160 | Not Available | Positive | 34789 - 35328 | 20016.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
