Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD05_01115 | Not Available | Positive | 239949 - 240734 | 29539.4 |
| proline dioxygenase | ASD05_01120 | Not Available | Positive | 240891 - 241733 | 30724.8 |
| alpha/beta hydrolase | ASD05_01125 | Not Available | Positive | 241744 - 242646 | 32073.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | ASD05_01130 | Not Available | Positive | 242643 - 243509 | 32518.3 |
| 3-hydroxyacyl-coa dehydrogenase | ASD05_01135 | Not Available | Positive | 243633 - 244538 | 31636.7 |
| lysr family transcriptional regulator | ASD05_01140 | Not Available | Positive | 244618 - 245508 | 32266.9 |
| 2-methylcitrate dehydratase | ASD05_01145 | Not Available | Negative | 245572 - 246939 | 48237.4 |
| acyl-coa dehydrogenase | ASD05_01150 | Not Available | Negative | 247049 - 248212 | 43021.6 |
| citrate synthase | ASD05_01155 | Not Available | Negative | 248229 - 249011 | 27753.7 |
| acyl-coa dehydrogenase | ASD05_01160 | Not Available | Positive | 249119 - 251446 | 83655.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
