Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-coa dehydrogenase large subunit | ASD05_00965 | Not Available | Negative | 208835 - 210016 | 43811.5 |
| phosphoribosylglycinamide formyltransferase | ASD05_00970 | Not Available | Positive | 210148 - 210744 | 20874.3 |
| peptidase inhibitor i78 | ASD05_00975 | Not Available | Positive | 210782 - 211099 | 10528.7 |
| hypothetical protein | ASD05_00980 | Not Available | Negative | 211169 - 211402 | 8820.51 |
| peptidase m48 | ASD05_00985 | Not Available | Positive | 211453 - 213306 | 70463.1 |
| sam-dependent methyltransferase | ASD05_00990 | Not Available | Positive | 213348 - 214619 | 46627.1 |
| aminotransferase | ASD05_00995 | Not Available | Positive | 214752 - 215966 | 46018.6 |
| 50s ribosomal protein l33 | ASD05_01000 | Not Available | Negative | 216145 - 216318 | 6547.1 |
| 50s ribosomal protein l28 | ASD05_01005 | Not Available | Negative | 216330 - 216563 | 8779.65 |
| thioredoxin reductase | ASD05_01010 | Not Available | Negative | 216747 - 217706 | 34411.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
