Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | ASD05_00815 | Not Available | Positive | 175596 - 176381 | 29218.1 |
| type ii secretion system protein e | ASD05_00820 | Not Available | Positive | 176378 - 178174 | 66067.3 |
| hypothetical protein | ASD05_00825 | Not Available | Positive | 178301 - 178789 | 17192.9 |
| hypothetical protein | ASD05_00830 | Not Available | Positive | 178809 - 180320 | 52806.2 |
| lysr family transcriptional regulator | ASD05_00835 | Not Available | Negative | 180452 - 181378 | 33491.1 |
| mfs transporter | ASD05_00840 | Not Available | Positive | 181474 - 182445 | 34034.2 |
| gamma-glutamyltransferase | ASD05_00845 | Not Available | Positive | 182462 - 184075 | 57692.9 |
| multidrug dmt transporter permease | ASD05_00850 | Not Available | Positive | 184097 - 185059 | 33922.8 |
| 3-oxoacyl-acp reductase | ASD05_00855 | Not Available | Positive | 185070 - 185864 | 27018.4 |
| hypothetical protein | ASD05_00860 | Not Available | Negative | 185981 - 186889 | 33034.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
