Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root434 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045514 bp
Thymine Count
1045964 bp
Guanine Count
2116129 bp
Cytosine Count
2114066 bp
Genome Length
6322190 bp
Protein-coding Genes
5684 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD05_00565 | Not Available | Negative | 126719 - 127102 | 13957.5 |
| atp-dependent clp protease proteolytic subunit | ASD05_00570 | Not Available | Positive | 127413 - 128009 | 21462.6 |
| hypothetical protein | ASD05_00575 | Not Available | Negative | 128027 - 128416 | 14024.8 |
| peptide abc transporter | ASD05_00580 | Not Available | Positive | 128607 - 130184 | 57392.1 |
| peptide abc transporter | ASD05_00585 | Not Available | Positive | 130216 - 131157 | 33257.7 |
| peptide abc transporter permease | ASD05_00590 | Not Available | Positive | 131161 - 132000 | 30259.4 |
| peptide abc transporter atp-binding protein | ASD05_00595 | Not Available | Positive | 132000 - 133037 | 37352.7 |
| peptide abc transporter atp-binding protein | ASD05_00600 | Not Available | Positive | 133192 - 134175 | 35495.9 |
| amino acid deaminase | ASD05_00605 | Not Available | Positive | 134172 - 135473 | 46884.0 |
| rpir family transcriptional regulator | ASD05_00610 | Not Available | Positive | 135484 - 136395 | 31996.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
