Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_04880 | Not Available | Negative | 1049150 - 1050055 | 33169.3 |
| hypothetical protein | ASC92_04885 | Not Available | Positive | 1050157 - 1050912 | 25771.5 |
| nudix hydrolase | ASC92_04890 | Not Available | Negative | 1050919 - 1051389 | 17181.5 |
| glutamyl-trna amidotransferase | ASC92_04895 | Not Available | Negative | 1051389 - 1051838 | 15860.5 |
| 30s ribosomal protein s21 | ASC92_04900 | Not Available | Negative | 1051948 - 1052160 | 8506.61 |
| hypothetical protein | ASC92_04905 | Not Available | Negative | 1052271 - 1053488 | 43316.7 |
| distant relative of cell wall-associated hydrolase | ASC92_04910 | Not Available | Negative | 1053485 - 1054273 | 27676.6 |
| fatty acid hydroxylase | ASC92_04915 | Not Available | Negative | 1054273 - 1055397 | 42721.4 |
| abc transporter permease | ASC92_04920 | Not Available | Negative | 1055461 - 1056351 | 31747.5 |
| abc transporter permease | ASC92_04925 | Not Available | Negative | 1056588 - 1057505 | 33772.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
