Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ASC92_04830 | Not Available | Negative | 1036635 - 1037963 | 48510.4 |
| two-component system response regulator | ASC92_04835 | Not Available | Negative | 1037960 - 1038637 | 25610.2 |
| hypothetical protein | ASC92_04840 | Not Available | Positive | 1038797 - 1039171 | 13645.9 |
| cobalt-zinc-cadmium resistance protein | ASC92_04845 | Not Available | Positive | 1039267 - 1040604 | 46878.6 |
| cytochrome c peroxidase | ASC92_04850 | Not Available | Positive | 1040627 - 1041991 | 48548.8 |
| cation transporter | ASC92_04855 | Not Available | Positive | 1042002 - 1045217 | 115755.0 |
| nmra family transcriptional regulator | ASC92_04860 | Not Available | Positive | 1045398 - 1046162 | 26531.6 |
| molybdenum cofactor biosynthesis protein moga | ASC92_04865 | Not Available | Negative | 1046279 - 1046869 | 20851.3 |
| ribosome-associated protein | ASC92_04870 | Not Available | Negative | 1046991 - 1047647 | 24329.8 |
| peptidase pmba | ASC92_04875 | Not Available | Positive | 1047752 - 1049122 | 48533.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
