Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_04780 | Not Available | Positive | 1024736 - 1025923 | 43316.0 |
| hypothetical protein | ASC92_04785 | Not Available | Negative | 1025942 - 1026334 | 14182.9 |
| mechanosensitive ion channel protein mscs | ASC92_04790 | Not Available | Negative | 1026342 - 1027421 | 39230.5 |
| hypothetical protein | ASC92_04795 | Not Available | Negative | 1027421 - 1029682 | 80918.2 |
| inositol monophosphatase | ASC92_04800 | Not Available | Negative | 1029685 - 1030740 | 37472.4 |
| rrna methyltransferase | ASC92_04805 | Not Available | Positive | 1030850 - 1031590 | 27076.7 |
| serine acetyltransferase | ASC92_04810 | Not Available | Positive | 1031674 - 1032444 | 27346.8 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | ASC92_04815 | Not Available | Negative | 1032457 - 1032927 | 17457.8 |
| 4-deoxy-4-formamido-l-arabinose-phospho-udp deformylase | ASC92_04820 | Not Available | Positive | 1032998 - 1035283 | 79477.7 |
| na+/h+-exchanging protein | ASC92_04825 | Not Available | Positive | 1035374 - 1036627 | 43166.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
