Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_04725 | Not Available | Positive | 1014974 - 1015894 | 33116.2 |
| hypothetical protein | ASC92_04735 | Not Available | Positive | 1016507 - 1016803 | 11107.2 |
| hypothetical protein | ASC92_04740 | Not Available | Positive | 1016932 - 1017669 | 27317.1 |
| hypothetical protein | ASC92_04745 | Not Available | Positive | 1017666 - 1018586 | 33612.8 |
| twin-arginine translocation pathway signal protein | ASC92_04750 | Not Available | Negative | 1018612 - 1019931 | 48679.7 |
| abc transporter substrate-binding protein | ASC92_04755 | Not Available | Negative | 1019954 - 1020946 | 35154.5 |
| hypothetical protein | ASC92_04760 | Not Available | Negative | 1020986 - 1021990 | 35910.5 |
| marr family transcriptional regulator | ASC92_04765 | Not Available | Positive | 1022097 - 1022621 | 18901.0 |
| tctc | ASC92_04770 | Not Available | Negative | 1022593 - 1023603 | 34787.3 |
| lysr family transcriptional regulator | ASC92_04775 | Not Available | Positive | 1023726 - 1024688 | 34065.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
