Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator | ASC92_04470 | Not Available | Positive | 955968 - 956873 | 33908.1 |
| ammonium transporter | ASC92_04475 | Not Available | Positive | 957025 - 958227 | 42097.6 |
| mbl fold metallo-hydrolase | ASC92_04480 | Not Available | Positive | 958303 - 959274 | 34591.7 |
| succinylglutamate desuccinylase | ASC92_04485 | Not Available | Positive | 959430 - 960365 | 34080.8 |
| peptidase m23 | ASC92_04490 | Not Available | Negative | 960414 - 961310 | 31685.4 |
| pseudouridine synthase | ASC92_04495 | Not Available | Negative | 961346 - 961930 | 21656.3 |
| hypothetical protein | ASC92_04500 | Not Available | Positive | 961981 - 962283 | 10116.2 |
| glutamine--trna ligase | ASC92_04505 | Not Available | Negative | 962295 - 964109 | 67318.2 |
| hypothetical protein | ASC92_04510 | Not Available | Positive | 964259 - 964606 | 12325.5 |
| lytr family transcriptional regulator | ASC92_04515 | Not Available | Negative | 964688 - 965518 | 30140.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
