Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_04420 | Not Available | Positive | 948852 - 949235 | 14263.9 |
| 3-hydroxyacyl-coa dehydrogenase | ASC92_04425 | Not Available | Positive | 949340 - 950266 | 31807.1 |
| ketosteroid isomerase | ASC92_04430 | Not Available | Positive | 950367 - 950795 | 15863.8 |
| merr family transcriptional regulator | ASC92_04435 | Not Available | Positive | 950785 - 951234 | 16997.7 |
| ribosomal subunit interface protein | ASC92_04440 | Not Available | Negative | 951241 - 951600 | 13364.6 |
| histidine kinase | ASC92_04445 | Not Available | Negative | 951722 - 952150 | 16034.5 |
| cell envelope protein smpa | ASC92_04450 | Not Available | Negative | 952296 - 952910 | 22467.2 |
| ribosome biogenesis gtpase ylqf | ASC92_04455 | Not Available | Positive | 953120 - 954082 | 34804.2 |
| phenylacetic acid degradation protein | ASC92_04460 | Not Available | Positive | 954231 - 954665 | 15194.2 |
| hypothetical protein | ASC92_04465 | Not Available | Negative | 954595 - 955812 | 45806.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
