Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ASC92_04215 | Not Available | Negative | 910403 - 911746 | 47702.2 |
| 3-oxoacyl-acp reductase | ASC92_04225 | Not Available | Negative | 913161 - 913934 | 26776.1 |
| ester cyclase | ASC92_04230 | Not Available | Negative | 913931 - 914440 | 19136.7 |
| crp/fnr family transcriptional regulator | ASC92_04235 | Not Available | Positive | 914583 - 915299 | 25996.4 |
| laci family transcriptional regulator | ASC92_04240 | Not Available | Negative | 915320 - 916288 | 34354.6 |
| peroxiredoxin | ASC92_04245 | Not Available | Negative | 916332 - 916772 | 15307.1 |
| long-chain fatty acid--coa ligase | ASC92_04250 | Not Available | Positive | 916998 - 918689 | 61886.4 |
| glycosyl transferase family 51 | ASC92_04255 | Not Available | Negative | 918745 - 921747 | 110543.0 |
| hypothetical protein | ASC92_04260 | Not Available | Negative | 921894 - 922373 | 17677.7 |
| nuclease | ASC92_04265 | Not Available | Positive | 922496 - 923014 | 19374.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
