Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxymuconolactone decarboxylase | ASC92_04115 | Not Available | Negative | 893072 - 893494 | 15040.0 |
| merr family transcriptional regulator | ASC92_04120 | Not Available | Negative | 893412 - 893909 | 18332.9 |
| aminobenzoate synthetase | ASC92_04125 | Not Available | Negative | 893962 - 895731 | 64594.7 |
| c4-dicarboxylate abc transporter substrate-binding protein | ASC92_04130 | Not Available | Negative | 895721 - 897100 | 50268.7 |
| peptidase s58 | ASC92_04135 | Not Available | Negative | 897118 - 898146 | 34062.9 |
| amino acid dehydrogenase | ASC92_04140 | Not Available | Positive | 898187 - 899479 | 45229.3 |
| rnd transporter | ASC92_04145 | Not Available | Negative | 899503 - 899793 | 10124.5 |
| metal-binding protein | ASC92_04150 | Not Available | Negative | 899825 - 900271 | 15781.2 |
| plastocyanin | ASC92_04155 | Not Available | Negative | 900288 - 900797 | 18123.9 |
| copper oxidase | ASC92_04160 | Not Available | Negative | 900828 - 902213 | 50773.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
