Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding protein | ASC92_04015 | Not Available | Negative | 870522 - 871217 | 25585.7 |
| hypothetical protein | ASC92_04020 | Not Available | Positive | 871319 - 872914 | 54896.5 |
| lysr family transcriptional regulator | ASC92_04025 | Not Available | Negative | 872954 - 873904 | 34489.5 |
| aromatic compound catabolic protein | ASC92_04030 | Not Available | Negative | 873935 - 874483 | 19554.8 |
| marr family transcriptional regulator | ASC92_04035 | Not Available | Positive | 874559 - 875014 | 16548.8 |
| mfs transporter | ASC92_04040 | Not Available | Positive | 875041 - 876354 | 46320.9 |
| mate family efflux transporter | ASC92_04045 | Not Available | Positive | 876374 - 877789 | 49018.4 |
| hypothetical protein | ASC92_04050 | Not Available | Negative | 877874 - 878191 | 12036.2 |
| hypothetical protein | ASC92_04055 | Not Available | Negative | 878387 - 879124 | 26440.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | ASC92_04060 | Not Available | Negative | 879162 - 879803 | 21668.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
