Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligand-gated channel protein | ASC92_03915 | Not Available | Positive | 851283 - 853376 | 75031.6 |
| transporter | ASC92_03920 | Not Available | Positive | 853477 - 854430 | 33684.8 |
| hypothetical protein | ASC92_03925 | Not Available | Positive | 854685 - 855062 | 13160.1 |
| flagellar motor protein motb | ASC92_03930 | Not Available | Positive | 855062 - 856270 | 43723.1 |
| pyridoxamine 5'-phosphate oxidase | ASC92_03935 | Not Available | Negative | 856283 - 856936 | 24593.0 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | ASC92_03940 | Not Available | Positive | 856966 - 857535 | 19178.1 |
| superoxide dismutase | ASC92_03945 | Not Available | Negative | 857555 - 858094 | 17912.0 |
| calcium transporter chac | ASC92_03950 | Not Available | Negative | 858091 - 858795 | 26431.4 |
| hypothetical protein | ASC92_03955 | Not Available | Positive | 858931 - 859488 | 18947.8 |
| phosphogluconate dehydratase | ASC92_03960 | Not Available | Positive | 859691 - 861532 | 64616.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
