Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_03765 | Not Available | Negative | 821291 - 821833 | 19312.4 |
| exodeoxyribonuclease iii | ASC92_03770 | Not Available | Negative | 821844 - 822629 | 29809.7 |
| gntr family transcriptional regulator | ASC92_03775 | Not Available | Negative | 822956 - 823669 | 26347.4 |
| abc transporter substrate-binding protein | ASC92_03780 | Not Available | Positive | 823871 - 825061 | 43695.1 |
| spermidine/putrescine abc transporter atp-binding protein | ASC92_03785 | Not Available | Positive | 825149 - 826249 | 39362.9 |
| abc transporter permease | ASC92_03790 | Not Available | Positive | 826246 - 827109 | 31372.8 |
| abc transporter permease | ASC92_03795 | Not Available | Positive | 827112 - 827954 | 30861.9 |
| dehydratase | ASC92_03800 | Not Available | Positive | 827966 - 829168 | 43522.3 |
| aldose epimerase | ASC92_03805 | Not Available | Positive | 829173 - 830153 | 35019.1 |
| dihydrodipicolinate synthase | ASC92_03810 | Not Available | Positive | 830146 - 831066 | 32406.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
