Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter substrate-binding protein | ASC92_03620 | Not Available | Negative | 790078 - 791046 | 35231.2 |
| hypothetical protein | ASC92_03625 | Not Available | Negative | 791191 - 791520 | 11259.8 |
| hypothetical protein | ASC92_03630 | Not Available | Negative | 791659 - 792828 | 43487.3 |
| hypothetical protein | ASC92_03635 | Not Available | Negative | 792818 - 793153 | 11845.4 |
| integration host factor subunit beta | ASC92_03640 | Not Available | Negative | 793211 - 793537 | 12034.4 |
| 30s ribosomal protein s1 | ASC92_03645 | Not Available | Negative | 793616 - 795304 | 61853.8 |
| cytidylate kinase | ASC92_03650 | Not Available | Negative | 795501 - 797513 | 71423.8 |
| prephenate dehydrogenase | ASC92_03655 | Not Available | Negative | 797515 - 798405 | 31452.7 |
| chorismate mutase | ASC92_03660 | Not Available | Negative | 798425 - 799549 | 40460.1 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | ASC92_03665 | Not Available | Negative | 799574 - 800704 | 41017.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
