Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | ASC92_00300 | Not Available | Negative | 69485 - 71053 | 56032.7 |
| pas domain-containing sensor histidine kinase | ASC92_00305 | Not Available | Negative | 71059 - 72756 | 61840.9 |
| hypothetical protein | ASC92_00310 | Not Available | Negative | 72753 - 73013 | 9451.56 |
| cytochrome c assembly protein | ASC92_00315 | Not Available | Negative | 73010 - 73822 | 28985.1 |
| signal recognition particle | ASC92_00320 | Not Available | Positive | 74007 - 75395 | 49562.2 |
| glucosyl transferase family 2 | ASC92_00325 | Not Available | Negative | 75584 - 77590 | 73267.4 |
| hypothetical protein | ASC92_00330 | Not Available | Negative | 77596 - 77799 | 7211.55 |
| response regulator glrr | ASC92_00335 | Not Available | Negative | 77993 - 79381 | 50322.6 |
| hypothetical protein | ASC92_00340 | Not Available | Negative | 79443 - 80111 | 23795.6 |
| histidine kinase | ASC92_00345 | Not Available | Negative | 80170 - 81597 | 52242.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
