Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | ASC92_03420 | Not Available | Negative | 747053 - 747643 | 20918.0 |
| 3-mercaptopyruvate sulfurtransferase | ASC92_03425 | Not Available | Negative | 747649 - 748557 | 32070.9 |
| hypothetical protein | ASC92_03430 | Not Available | Negative | 748598 - 749515 | 31940.5 |
| rieske (2fe-2s) protein | ASC92_03435 | Not Available | Negative | 749539 - 750678 | 43211.9 |
| exodeoxyribonuclease vii | ASC92_03440 | Not Available | Positive | 750954 - 751220 | 9389.16 |
| polyprenyl synthetase | ASC92_03445 | Not Available | Positive | 751217 - 752137 | 31592.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ASC92_03450 | Not Available | Positive | 752318 - 754177 | 66467.1 |
| abc transporter substrate-binding protein | ASC92_03455 | Not Available | Positive | 754287 - 755369 | 39639.5 |
| c4-dicarboxylate abc transporter | ASC92_03460 | Not Available | Negative | 755487 - 757319 | 65024.4 |
| c4-dicarboxylate abc transporter substrate-binding protein | ASC92_03465 | Not Available | Negative | 757341 - 757955 | 22746.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
