Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | ASC92_03215 | Not Available | Positive | 707199 - 708344 | 39613.9 |
| oxidoreductase | ASC92_03220 | Not Available | Positive | 708368 - 709687 | 48760.9 |
| aromatic-ring-hydroxylating dioxygenase | ASC92_03225 | Not Available | Positive | 709684 - 710148 | 17564.8 |
| branched-chain amino acid abc transporter substrate-binding protein | ASC92_03230 | Not Available | Positive | 710189 - 711352 | 40868.5 |
| abc transporter permease | ASC92_03235 | Not Available | Positive | 711387 - 712442 | 36380.9 |
| hypothetical protein | ASC92_03240 | Not Available | Positive | 712439 - 714226 | 63399.8 |
| abc transporter atp-binding protein | ASC92_03245 | Not Available | Positive | 714223 - 714954 | 26195.8 |
| atp-dependent acyl-coa ligase | ASC92_03250 | Not Available | Positive | 714944 - 716536 | 56758.9 |
| 3-hydroxyacyl-coa dehydrogenase | ASC92_03255 | Not Available | Positive | 716559 - 717335 | 26258.2 |
| marr family transcriptional regulator | ASC92_03260 | Not Available | Positive | 717332 - 717865 | 20318.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
