Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate oxidoreductase subunit b | ASC92_03165 | Not Available | Positive | 695470 - 696954 | 53793.8 |
| ferredoxin | ASC92_03170 | Not Available | Positive | 696971 - 697963 | 35696.9 |
| oxidoreductase | ASC92_03175 | Not Available | Positive | 697980 - 699293 | 49545.7 |
| phenylpropionate dioxygenase | ASC92_03180 | Not Available | Positive | 699413 - 699895 | 18774.2 |
| atp-dependent acyl-coa ligase | ASC92_03185 | Not Available | Positive | 699903 - 701528 | 58273.4 |
| acetyl-coa acetyltransferase | ASC92_03190 | Not Available | Positive | 701525 - 702697 | 41790.6 |
| short-chain dehydrogenase | ASC92_03195 | Not Available | Positive | 702694 - 703947 | 45322.5 |
| cyclase | ASC92_03200 | Not Available | Positive | 703963 - 704775 | 29740.3 |
| short-chain dehydrogenase | ASC92_03205 | Not Available | Positive | 704915 - 705649 | 25611.0 |
| branched-chain amino acid abc transporter substrate-binding protein | ASC92_03210 | Not Available | Positive | 705702 - 706868 | 40857.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
