Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pterin-4-alpha-carbinolamine dehydratase | ASC92_03115 | Not Available | Negative | 683996 - 684349 | 12823.1 |
| peptidase m48 | ASC92_03120 | Not Available | Negative | 684472 - 685725 | 45933.8 |
| oligoribonuclease | ASC92_03125 | Not Available | Positive | 685785 - 686381 | 22250.6 |
| dead/deah box helicase | ASC92_03130 | Not Available | Positive | 686635 - 688545 | 68439.0 |
| glycerol-3-phosphate dehydrogenase | ASC92_03135 | Not Available | Positive | 688757 - 689830 | 38459.1 |
| 3-hydroxybutyryl-coa dehydrogenase | ASC92_03140 | Not Available | Positive | 689820 - 690824 | 35925.3 |
| alpha/beta hydrolase | ASC92_03145 | Not Available | Positive | 690821 - 691618 | 28838.5 |
| alcohol dehydrogenase | ASC92_03150 | Not Available | Positive | 691615 - 692499 | 30787.2 |
| marr family transcriptional regulator | ASC92_03155 | Not Available | Negative | 692518 - 693000 | 18265.8 |
| indolepyruvate ferredoxin oxidoreductase | ASC92_03160 | Not Available | Positive | 693145 - 695331 | 78310.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
