Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | ASC92_03065 | Not Available | Negative | 676176 - 676700 | 18716.3 |
| 30s ribosomal protein s16 | ASC92_03070 | Not Available | Positive | 676881 - 677144 | 9644.72 |
| 16s rrna processing protein rimm | ASC92_03075 | Not Available | Positive | 677161 - 677715 | 20063.8 |
| trna (guanine-n1)-methyltransferase | ASC92_03080 | Not Available | Positive | 677732 - 678478 | 26994.4 |
| 50s ribosomal protein l19 | ASC92_03085 | Not Available | Positive | 678588 - 678965 | 13923.0 |
| dna mismatch repair protein mutt | ASC92_03090 | Not Available | Positive | 679090 - 679830 | 26765.8 |
| cobalamin biosynthesis protein cbib | ASC92_03095 | Not Available | Positive | 679872 - 680873 | 36209.6 |
| histidinol-phosphate aminotransferase | ASC92_03100 | Not Available | Positive | 680890 - 681981 | 39908.9 |
| hypothetical protein | ASC92_03105 | Not Available | Positive | 681995 - 683020 | 37974.7 |
| gtpase rsga | ASC92_03110 | Not Available | Negative | 683033 - 683983 | 34479.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
