Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thij | ASC92_03015 | Not Available | Negative | 667388 - 668002 | 21689.8 |
| hydrolase | ASC92_03020 | Not Available | Negative | 668008 - 668568 | 19810.4 |
| permease | ASC92_03025 | Not Available | Negative | 668688 - 669770 | 38843.7 |
| phosphoribosylaminoimidazole synthetase | ASC92_03030 | Not Available | Negative | 669823 - 670863 | 35895.5 |
| dnaa regulatory inactivator hda | ASC92_03035 | Not Available | Positive | 670988 - 671689 | 25588.7 |
| poly(a) polymerase | ASC92_03040 | Not Available | Positive | 671716 - 673314 | 59438.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | ASC92_03045 | Not Available | Positive | 673464 - 673922 | 16392.9 |
| phosphate transport regulator | ASC92_03050 | Not Available | Positive | 674049 - 674693 | 24611.4 |
| inorganic phosphate transporter | ASC92_03055 | Not Available | Positive | 674708 - 675718 | 35073.3 |
| hypothetical protein | ASC92_03060 | Not Available | Negative | 675722 - 676168 | 16337.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
