Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine aminotransferase | ASC92_02965 | Not Available | Negative | 658906 - 660114 | 42821.1 |
| hypothetical protein | ASC92_02970 | Not Available | Positive | 660276 - 660599 | 11677.0 |
| 30s ribosomal protein s20 | ASC92_02975 | Not Available | Negative | 660747 - 661061 | 11201.7 |
| murein biosynthesis protein murj | ASC92_02980 | Not Available | Positive | 661181 - 662734 | 54967.2 |
| transglutaminase | ASC92_02985 | Not Available | Positive | 662819 - 663670 | 31700.9 |
| glyoxalase | ASC92_02990 | Not Available | Positive | 663672 - 664100 | 15892.0 |
| dehydrogenase | ASC92_02995 | Not Available | Positive | 664244 - 664675 | 15856.0 |
| transcription initiation protein | ASC92_03000 | Not Available | Positive | 664702 - 665127 | 15258.3 |
| rna polymerase subunit sigma-24 | ASC92_03005 | Not Available | Positive | 665124 - 666419 | 46924.5 |
| arac family transcriptional regulator | ASC92_03010 | Not Available | Negative | 666423 - 667418 | 35534.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
