Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase a | ASC92_02755 | Not Available | Negative | 613397 - 614218 | 30381.2 |
| hypothetical protein | ASC92_02760 | Not Available | Negative | 614249 - 617047 | 94003.4 |
| aspartate-semialdehyde dehydrogenase | ASC92_02765 | Not Available | Negative | 617217 - 618362 | 40613.3 |
| 3-isopropylmalate dehydrogenase | ASC92_02770 | Not Available | Negative | 618452 - 619540 | 39199.2 |
| 3-isopropylmalate dehydratase | ASC92_02775 | Not Available | Negative | 619578 - 620228 | 24287.1 |
| isopropylmalate isomerase | ASC92_02780 | Not Available | Negative | 620246 - 621667 | 50736.7 |
| lysr family transcriptional regulator | ASC92_02785 | Not Available | Negative | 621713 - 622666 | 34523.4 |
| entericidin | ASC92_02790 | Not Available | Negative | 622783 - 622923 | 4937.01 |
| type ii citrate synthase | ASC92_02795 | Not Available | Negative | 623045 - 624355 | 48570.6 |
| hypothetical protein | ASC92_02800 | Not Available | Negative | 624380 - 624694 | 11737.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
