Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin secretion protein d | ASC92_22685 | Not Available | Positive | 6008853 - 6009977 | 38721.2 |
| multidrug transporter | ASC92_22690 | Not Available | Positive | 6009974 - 6013051 | 111381.0 |
| short-chain dehydrogenase | ASC92_22695 | Not Available | Positive | 6013091 - 6013897 | 28432.4 |
| lysr family transcriptional regulator | ASC92_22700 | Not Available | Positive | 6013938 - 6014843 | 33232.4 |
| diguanylate cyclase | ASC92_22705 | Not Available | Negative | 6015186 - 6017510 | 86349.0 |
| histidine kinase | ASC92_22710 | Not Available | Negative | 6017507 - 6019192 | 60896.2 |
| hypothetical protein | ASC92_22715 | Not Available | Negative | 6019223 - 6020932 | 63648.2 |
| hypothetical protein | ASC92_22720 | Not Available | Positive | 6021311 - 6021541 | 8519.73 |
| hypothetical protein | ASC92_22725 | Not Available | Positive | 6021624 - 6022547 | 33155.7 |
| hypothetical protein | ASC92_22730 | Not Available | Negative | 6022597 - 6023091 | 18076.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
