Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | ASC92_22535 | Not Available | Negative | 5969331 - 5971094 | 62169.0 |
| c4-dicarboxylate abc transporter substrate-binding protein | ASC92_22540 | Not Available | Positive | 5971268 - 5972257 | 36428.3 |
| gtp-binding protein | ASC92_22545 | Not Available | Negative | 5972268 - 5973683 | 50682.5 |
| hypothetical protein | ASC92_22550 | Not Available | Negative | 5973680 - 5975086 | 50461.5 |
| multidrug abc transporter atp-binding protein | ASC92_22555 | Not Available | Negative | 5975486 - 5977342 | 67543.5 |
| lysr family transcriptional regulator | ASC92_22560 | Not Available | Negative | 5977364 - 5978308 | 34685.4 |
| aromatic ring-opening dioxygenase liga | ASC92_22565 | Not Available | Positive | 5978410 - 5979237 | 29806.5 |
| glycosyl transferase | ASC92_22570 | Not Available | Negative | 5979242 - 5980705 | 53343.7 |
| cytochrome b | ASC92_22575 | Not Available | Positive | 5980842 - 5981402 | 20919.0 |
| alpha/beta hydrolase | ASC92_22580 | Not Available | Positive | 5981399 - 5982256 | 30637.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
