Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ASC92_22480 | Not Available | Positive | 5958134 - 5959105 | 34383.4 |
| multidrug transporter | ASC92_22485 | Not Available | Positive | 5959185 - 5960591 | 48264.0 |
| class a beta-lactamase | ASC92_22490 | Not Available | Positive | 5960720 - 5961607 | 30794.8 |
| laci family transcriptional regulator | ASC92_22495 | Not Available | Negative | 5961615 - 5962646 | 36825.3 |
| arac family transcriptional regulator | ASC92_22505 | Not Available | Positive | 5964467 - 5965357 | 33287.8 |
| hemolysin d | ASC92_22510 | Not Available | Negative | 5965361 - 5965984 | 22313.6 |
| glycerophosphodiester phosphodiesterase | ASC92_22515 | Not Available | Negative | 5966006 - 5967457 | 51376.9 |
| rna polymerase subunit sigma | ASC92_22520 | Not Available | Positive | 5967612 - 5968337 | 26668.7 |
| ferritin | ASC92_22525 | Not Available | Positive | 5968363 - 5968935 | 19647.8 |
| cytochrome c | ASC92_22530 | Not Available | Positive | 5968977 - 5969321 | 12262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
