Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_22175 | Not Available | Negative | 5893346 - 5893882 | 20088.3 |
| c4-dicarboxylate abc transporter permease | ASC92_22180 | Not Available | Negative | 5893959 - 5895236 | 45061.3 |
| c4-dicarboxylate abc transporter | ASC92_22185 | Not Available | Negative | 5895233 - 5895727 | 18561.5 |
| c4-dicarboxylate abc transporter substrate-binding protein | ASC92_22190 | Not Available | Negative | 5895724 - 5896692 | 35051.1 |
| nad-dependent epimerase | ASC92_22195 | Not Available | Negative | 5896745 - 5897764 | 35783.2 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | ASC92_22200 | Not Available | Negative | 5897880 - 5899577 | 62025.4 |
| short-chain dehydrogenase | ASC92_22205 | Not Available | Positive | 5899700 - 5900482 | 27409.0 |
| thioesterase | ASC92_22210 | Not Available | Positive | 5900504 - 5900926 | 15942.2 |
| histidine kinase | ASC92_22215 | Not Available | Negative | 5900947 - 5902299 | 49510.1 |
| two-component system response regulator | ASC92_22220 | Not Available | Negative | 5902296 - 5902970 | 24731.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
