Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | ASC92_02605 | Not Available | Positive | 584737 - 585717 | 34255.3 |
| acp s-malonyltransferase | ASC92_02610 | Not Available | Positive | 585771 - 586724 | 32404.2 |
| 3-ketoacyl-acp reductase | ASC92_02615 | Not Available | Positive | 586754 - 587497 | 25624.9 |
| acyl carrier protein | ASC92_02620 | Not Available | Positive | 587597 - 587836 | 8643.06 |
| 3-oxoacyl-acp synthase | ASC92_02625 | Not Available | Positive | 587936 - 589180 | 43482.8 |
| hypothetical protein | ASC92_02630 | Not Available | Positive | 589197 - 589679 | 17525.0 |
| rna polymerase sigma factor rpoe | ASC92_02635 | Not Available | Positive | 589729 - 590364 | 23889.4 |
| anti-sigma factor | ASC92_02640 | Not Available | Positive | 590382 - 591056 | 23223.5 |
| transcriptional regulator | ASC92_02645 | Not Available | Positive | 591086 - 592168 | 39580.9 |
| serine peptidase | ASC92_02650 | Not Available | Positive | 592266 - 593747 | 52538.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
