Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | ASC92_21960 | Not Available | Positive | 5848350 - 5849561 | 42539.4 |
| carboxymuconolactone decarboxylase | ASC92_21965 | Not Available | Positive | 5849558 - 5849980 | 15502.8 |
| mfs transporter | ASC92_21970 | Not Available | Positive | 5849977 - 5851200 | 42835.1 |
| 3-oxoadipate enol-lactonase | ASC92_21975 | Not Available | Positive | 5851197 - 5851961 | 26867.3 |
| 4-hydroxyphenylpyruvate dioxygenase | ASC92_21980 | Not Available | Positive | 5852095 - 5853987 | 68584.6 |
| 3-phenylpropionic acid transporter | ASC92_21985 | Not Available | Positive | 5854019 - 5855428 | 50489.3 |
| disulfide bond formation protein dsba | ASC92_21990 | Not Available | Positive | 5855492 - 5856175 | 25138.6 |
| hypothetical protein | ASC92_21995 | Not Available | Positive | 5856295 - 5857857 | 57424.4 |
| hypothetical protein | ASC92_22000 | Not Available | Positive | 5858017 - 5859228 | 43412.8 |
| oxidoreductase | ASC92_22010 | Not Available | Negative | 5860865 - 5861626 | 25739.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
